Difference between revisions of "Rocky R HelloWorld"
From NIMBioS
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'''helloworld.run''' | '''helloworld.run''' | ||
<pre> | <pre> | ||
#!/bin/bash | |||
#SBATCH --job-name=R_HELLOWORLD | #SBATCH --job-name=R_HELLOWORLD | ||
#SBATCH --output=R_hello_%j.out | #SBATCH --output=R_hello_%j.out | ||
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module load R/4.2.1-foss-2022a | module load R/4.2.1-foss-2022a | ||
Rscript helloworld. | Rscript helloworld.R | ||
</pre> | </pre> | ||
Latest revision as of 18:37, 25 April 2023
R Code
helloworld.R
print("Hello World!")
Batch Script
helloworld.run
#!/bin/bash #SBATCH --job-name=R_HELLOWORLD #SBATCH --output=R_hello_%j.out module load R/4.2.1-foss-2022a Rscript helloworld.R
Running Job
[test_user@rocky7 helloworld]$ pwd /home/test_user/projects/R/helloworld
[test_user@rocky7 helloworld]$ ls helloworld.R helloworld.run
[test_user@rocky7 helloworld]$ sbatch helloworld.run Submitted batch job 3875
[test_user@rocky7 helloworld]$ ls helloworld.py helloworld.run R_hell0_3875.out
[test_user@rocky7 helloworld]$ cat R_hell0_3875.out Hello World!
