Difference between revisions of "Rocky R HelloWorld"

From NIMBioS
m
(Update R module to latest version)
 
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'''helloworld.run'''
'''helloworld.run'''
<pre>
<pre>
#!/bin/bash
#SBATCH --job-name=R_HELLOWORLD
#SBATCH --job-name=R_HELLOWORLD
#SBATCH --output=R_hello_%j.out
#SBATCH --output=R_hello_%j.out


module load R/4.2.1-foss-2022a
module load R-bundle-CRAN/2025.10-foss-2025a


Rscript helloworld.R
Rscript helloworld.R

Latest revision as of 14:15, 8 January 2026

R Code

helloworld.R

print("Hello World!")


Batch Script

helloworld.run

#!/bin/bash

#SBATCH --job-name=R_HELLOWORLD
#SBATCH --output=R_hello_%j.out

module load R-bundle-CRAN/2025.10-foss-2025a

Rscript helloworld.R


Running Job

[test_user@rocky7 helloworld]$ pwd
/home/test_user/projects/R/helloworld
[test_user@rocky7 helloworld]$ ls
helloworld.R  helloworld.run
[test_user@rocky7 helloworld]$ sbatch helloworld.run 
Submitted batch job 3875
[test_user@rocky7 helloworld]$ ls
helloworld.py  helloworld.run  R_hell0_3875.out
[test_user@rocky7 helloworld]$ cat R_hell0_3875.out 
Hello World!